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Warning message cellGrowth package
cellGrowth
warning message
6.1 years ago
muitalegal888
• 0
1
vote
4
replies
2.0k
views
DiffBind error with dba.count after update
diffbind
read counting
warning message
chromatin
atac-seq
updated 6.5 years ago by
Gord Brown
▴ 650 • written 6.5 years ago by
tgjohnst
• 0
1
vote
1
reply
2.8k
views
goseq: In pcls(G) : initial point very close to some inequality constraints
goseq
warning message
pwf
mgcv
updated 6.7 years ago by
Nadia Davidson
▴ 310 • written 6.8 years ago by
heikki.sarin
▴ 10
1
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2
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4.9k
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Limma: Warning Messages -- rlm -- Is there a way to fix it?
limma
warning message
updated 7.4 years ago by
Gordon Smyth
50k • written 7.4 years ago by
alakatos
▴ 130
1
vote
1
reply
1.2k
views
xcms warning message
R
xcms
warning message
updated 7.4 years ago by
Johannes Rainer
★ 2.0k • written 7.4 years ago by
deepalikale2007
• 0
0
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0
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774
views
mzR Rcpp compiler linker issue
warning message
software error
7.6 years ago
arvindkorwar77
• 0
2
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1
reply
1.2k
views
Warnings messages can not we handles/hidden
warning message
warning
R
rhdf5
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
matiasb
• 0
2
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4
replies
1.5k
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DEXSeqHTML doesn't creates plots
dexseq
DEXSeqHTML
data representation in graphical forms
warning message
8.5 years ago
Assa Yeroslaviz
★ 1.5k
1
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1
reply
3.0k
views
[Windows 10] 64. Problem installing biocLite due Warning on non writable directory
installation
windows10
not-writable
warning message
library
8.5 years ago
juancaf
• 0
0
votes
1
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1.4k
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Unable to load Bioconductor with R version 3.2.2
R
Bioconductor
software error
warning message
8.6 years ago
nmlee
• 0
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Answer: Batch effect correction: methylome data
by
zhouwanding
▴ 10
I agree that the batch variable should be better modeled as a co-variate than explicit batch correction. There is also RUVm (https://www.nc…
Comment: Can I trust the differential expression analysis when the two groups overlap on
by
Eric Katagirya
• 0
Thanks @bioinfguru - I did the 3-D PCA plot ![PC1 vs PC3 plot][1] and also the scree plot ![Scree plot][2] but couldn't make much of the…
Answer: Can log2cpm be used for proteomics data normalization?
by
James W. MacDonald
65k
The term 'logCPM' is short for log counts/million counts, which is generally only applicable for count-based applications like RNA-Seq. Usu…
Comment: Retrieving ceRNA data from the starBase or ENCORI Web API
by
James W. MacDonald
65k
This post does not fit the theme of this forum.
Answer: Batch effect correction: methylome data
by
James W. MacDonald
65k
Unless you are using `DSS`, you shouldn't be using Beta values, but instead should be using M-values. It's not clear to me that you can sim…
Votes
Ensembl 112 has been released.
A: Diffbind results - non uniform width
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Answer: Error EPICv2 ChAMP
Comment: Store output of matchPWM()
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